Annotation

To annotate identified Open Reading Frames please upload GTF file then click the button Annotate.

Settings:

Select name of BSgenome data package with full genome sequences

Progress of annotation:

ORF sequences:

RNA transcript ID ORF sequence Width

Premature termination codons:

RNA transcript ID ORF start ORF stop ORF len Prob Stop status

In silico translated proteins:

RNA transcript ID Protein sequence Width

Basic annotation of identified ORFs:

RNA Transcript ID 5'UTR len Start codon ORF start ORF stop Stop codon Stop status ORF len 3'UTR len MW pI indexPPI